Gut Infections

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Short incubation periods

 

Staphylococcus Aureus

A Gram-positive bacterium which produces toxins causing intestinal inflammation.

The bacteria makes enterotoxins to compete with other bacteria in cooked and processed foods, but these end up being ingested by humans, causing symptoms

The symptoms are due to the toxin rather than the bacteria, which gives the short incubation period of 1–6 hours.

 

Symptoms

Nausea and explosive vomiting up to 24 hours

Abdominal pain, weakness and headache

 

Key tests

Stool culture to assess if bacterium is present

Management

Fluid and electrolyte replacement as illness quickly resolves within a couple days

 

Bacillus Cereus

This is a Gram-positive rod bacterium which typically is found in the soil and water

It usually causes food poisoning but also causes host of infections in immunocompromised patients

Classically associated with eating under-cooked or reheated rice e.g. from Chinese takeaways

It cause 2 main types of syndromes:

 

Emetic Syndrome

This is due to ingestion of the toxin cereulide which is stable in high temperatures

This means that it survives the cooking process and can be ingested by humans

Gives vomiting 1-6 hours after ingestion and resolves within 1 day

 

Diarrhoeal syndrome

This is due to toxins like haemolysin which give crampy stomach pain and diarrhoea

Symptoms develop 8-15 hours after ingestion and resolve within 1 day

 

Management

Usually self-limiting within 24 hours

 

Medium incubation periods

 

Typhoid

This is an infection due to the bacteria Salmonella typhi, which is spread faeco-orally

Incidence is highest in children. Geographically, the highest prevalence of the disease is in India.

The bacteria infect the gut but then enter the blood giving systemic symptoms

 

Symptoms

Week 1 – fever with malaise, headache and cough

 

Week 2 – High fever (40ºC) and bradycardia

Muscle aches and complete exhaustion

Rose spots seen on lower chest + abdomen

Abdomen becomes distended with constipation

 

Week 3 – Complications e.g. GI bleed, meningitis,

Cholecystitis

Osteomyelitis – especially in sickle cell disease

 

Week 4 – Symptoms start to subside

Key tests

Cultures grown from blood, bone marrow or stool

Can also diagnose with the Widal test (serological for salmonella antigens)

 

Management

Oral rehydration therapy to maintain hydration and electrolytes

Antibiotics can be used, e.g., ciprofloxacin

 

Cholera

This an infection of the small bowel due to Gram-negative bacteria Vibrio cholerae.

It is spread by food and water contaminated by human faeces.

It colonises the small intestine, releasing cholera toxin, causing cAMP production.

This opens sodium, potassium and bicarbonate channels in cells, meaning they secrete ions and water, which leads to loss of water and rapid dehydration.

Symptoms start acute from 1–5 days after ingestion. 

Symptoms 

High volume watery vomit

High volume “rice-water” diarrhoea

Dehydration – cold skin, sunken eyes, wrinkling of hands and feet

Electrolyte imbalance

 

Key tests

Rapid dipstick test available

Stool test is definitive

 

Management

Oral rehydration therapy and antibiotics (doxycycline) if needed

 

E. Coli

This is a Gram-negative rod which is present in the gut as a commensal bacterium but can cause infection

It gives neonatal meningitis, urinary tract infections but also types of diarrhoea according to strain

Sub-classified into specific E.coli species by the antigens that trigger an immune response:

O = Lipopolysaccharide layer

= Capsule

H = flagellin

 

Enterotoxigenic E. Coli

This type is the main cause of traveller’s diarrhoea spread through food and water.

It secretes enterotoxins which lead to watery diarrhoea with cramps and nausea.

Most cases resolve without antibiotics and are managed with oral rehydration salts.

 

Enterohaemorrhagic E. Coli

This refers to E. Coli 0157:H7 which is spread by contaminated beef.

It produces the Shiga toxin which causes a severe, haemorrhagic bloody diarrhoea.

The mortality rate is high and it can cause haemolytic uraemic syndrome in children.

 

Uropathogenic E. Coli

This is one of main causes of urinary tract infections

 

Dysentery

This is a type of gastroenteritis that causes bloody diarrhoea.

It is usually due to the bacterium Shigella which is spread by food which is contaminated with faeces.

The bacteria colonies the large intestine and makes inflammatory cytotoxins.

This leads to symptoms which usually take two or three days to develop

 

Symptoms 

Large volume bloody diarrhoea with abdominal pain and a feeling of incomplete defecation

Fever and dehydration

Nausea/vomiting is rare

 

Key tests

Stool culture

 

Management

Oral rehydration therapy, antibiotics (e.g., ciprofloxacin) if severe

 

Campylobacter

This is a Gram-negative bacterium which is usually found in poultry (so enquire about chicken consumption when taking a clinical history)

The strains C. jejuni and C. coli are one of the main causes of bacterial gastroenteritis.

Symptoms usually take about 2–3 days to develop from ingestion.

 

Symptoms

Prodrome of fever and fatigue (flu-like)

Subsequent development of crampy abdominal pain and (bloody) diarrhoea

Can lead to Guillain-Barr. syndrome

 

Key tests

Stool tests

 

Management

Usually self-limiting and symptoms resolve after 5–7 days

Oral rehydration solution to maintain hydration and electrolytes

If severe, treat with antibiotics, e.g., clarithromycin or ciprofloxacin

 

Parasitic (Longest Incubation Periods)

 

Amoebiasis

This is an infection caused by the parasite Entamoeba histolytica. Transmission is faeco-orally.

It can be completely asymptomatic but can cause severe dysentery and liver abscesses

It is transmitted through contaminated food and water and seen more in the developing world

 

Symptoms

Gives bloody diarrhoea with intense abdominal pains

Can lead to ulceration of the intestines

Liver abscess – parasite enters bloodstream and migrates to liver giving RUQ pain and fever

Presents as mass in the right lobe, which is filled with pus described as “anchovy sauce”

 

Key tests

Need a “hot stool sample” which shows trophozoites

Serological tests (these are more sensitive if liver abscess)

 

Management

Metronidazole

 

Giardiasis

This is an infection due to the protozoan Giardia lamblia, which is spread faeco-orally.

It can be completely asymptomatic but can cause chronic diarrhoea.

It is spread when the cysts in faeces contaminate water and food, usually in the developing world.

Symptoms take 1–2 weeks to develop and last up to 6 weeks.

Symptoms 

Lethargy

Abdominal pain and bloating

Chronic non-bloody diarrhoea which is foul smelling and floats

Malabsorption of nutrients – gives fatty stool, weight loss and fatigue

 

Key tests

Stool sample to look for trophozoites

 

Management

Metronidazole

 

Viral

 

Norovirus

Norovirus is the commonest viral cause of gastroenteritis. Sometimes referred to as the “winter vomiting bug.”

Virus is spread by faeco-oral route which can be in contaminated food/water but also person-to-person

Commonly spreads in environments where people kept in close contact e.g. hospitals

No vaccine exists, and alcohol hand-sanitizer is non-effective so can only prevent it by washing hands

Transmission can be aerosolized e.g. Vomiting in toilet spreads particles in air that others breathe in

Symptoms 

Nausea, vomiting and watery diarrhoea

Abdominal pain and lethargy

Weakness and low-grade fever

 

Key tests

Stool culture PCR

 

Management

Disease is usually self-limiting but manage symptoms with fluids and antiemetics 

 
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